STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL42970.1PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: npu:Npun_F0232 short-chain dehydrogenase/reductase SDR. (336 aa)    
Predicted Functional Partners:
ACL42968.1
PFAM: cyclase/dehydrase; KEGG: ava:Ava_4497 cyclase/dehydrase.
 
     0.737
ACL42744.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ava:Ava_0980 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.619
ACL45225.1
Beta-ketoacyl synthase; PFAM: Thioesterase; Enoyl-CoA hydratase/isomerase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_CR073 KR.
  
 
 0.520
ACL42971.1
PFAM: protein of unknown function DUF820; KEGG: gvi:gll2990 hypothetical protein.
       0.460
ACL42969.1
TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: npu:Npun_R6239 PfpI family intracellular peptidase.
  
    0.457
ACL47522.1
PFAM: fatty acid desaturase; KEGG: npu:Npun_F4798 fatty acid desaturase.
  
     0.414
ACL45137.1
KEGG: npu:Npun_R3531 hypothetical protein.
  
     0.412
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.