STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43011.1PFAM: beta-lactamase; KEGG: sus:Acid_2490 beta-lactamase. (377 aa)    
Predicted Functional Partners:
ACL47364.1
Cyclic peptide transporter; KEGG: tel:tlr1649 ABC transporter ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
 
      0.893
ACL42896.1
KEGG: amr:AM1_4823 cyclic peptide ABC transporter, ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
 
      0.804
ACL43225.1
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: amr:AM1_3082 beta-glucosidase, putative.
  
 0.758
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
 
     0.603
glk
Glucokinase; KEGG: npu:Npun_R5075 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
       0.550
ACL43736.1
PFAM: Amidohydrolase 3; KEGG: rha:RHA1_ro00158 metal-dependant glycoprotease.
 
     0.470
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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