STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43060.1PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: syp:SYNPCC7002_A2189 ABC transporter family protein. (578 aa)    
Predicted Functional Partners:
ACL43061.1
PFAM: S-layer domain protein; KEGG: amr:AM1_1282 S-layer region-like protein, putative.
       0.686
ACL43059.1
PFAM: regulatory protein ArsR; KEGG: npu:Npun_F6484 ArsR family transcriptional regulator.
       0.648
ACL45225.1
Beta-ketoacyl synthase; PFAM: Thioesterase; Enoyl-CoA hydratase/isomerase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_CR073 KR.
  
 0.644
ACL43062.1
KEGG: ana:all4892 hypothetical protein.
 
     0.584
ACL46811.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
     0.502
ACL45834.1
PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: gvi:glr1833 probable hemolysin.
  
 
 0.467
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
   0.448
ACL46781.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.439
ACL46780.1
KEGG: tel:tll1784 hypothetical protein.
  
     0.434
ACL43054.1
TIGRFAM: arsenate reductase, glutathione/glutaredoxin type; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: npu:Npun_F6486 protein tyrosine phosphatase.
   
   0.432
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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