STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43063.1PFAM: Rho termination factor domain protein; KEGG: tel:tll2067 hypothetical protein. (413 aa)    
Predicted Functional Partners:
ACL46125.1
PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: tel:tll1974 hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
 
     0.756
ACL43062.1
KEGG: ana:all4892 hypothetical protein.
 
     0.738
ACL43639.1
KEGG: ana:all0476 hypothetical protein.
  
     0.698
ACL46710.1
KEGG: amr:AM1_4418 hypothetical protein.
  
     0.695
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.693
ACL43991.1
TIGRFAM: CO2 hydration protein; PFAM: CO2 hydration family protein; KEGG: ana:alr0871 putative CO2 hydration protein.
  
     0.671
ACL46784.1
KEGG: npu:Npun_R5096 hypothetical protein.
  
     0.670
ACL42946.1
KEGG: tel:tlr0805 hypothetical protein.
  
     0.666
ACL47162.1
TIGRFAM: CO2 hydration protein; PFAM: CO2 hydration family protein; KEGG: tel:tlr0906 protein involved in low CO2-inducible, high affinity CO2 uptake, CupA homolog.
  
     0.654
ACL46604.1
KEGG: tel:tlr2451 hypothetical protein.
  
     0.647
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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