STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43076.1KEGG: ava:Ava_3871 hypothetical protein. (135 aa)    
Predicted Functional Partners:
ACL44922.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tel:tll0269 hypothetical protein.
  
     0.769
ACL43753.1
KEGG: ava:Ava_3168 hypothetical protein.
  
     0.768
ACL44647.1
KEGG: tel:tlr0757 hypothetical protein.
  
     0.767
ACL43321.1
KEGG: amr:AM1_1354 hypothetical protein.
  
     0.754
ACL45657.1
PFAM: protein of unknown function DUF1239; KEGG: npu:Npun_R0090 hypothetical protein.
  
     0.753
ACL45667.1
KEGG: amr:AM1_0431 hypothetical protein.
  
     0.753
ACL44188.1
KEGG: cyt:cce_3698 hypothetical protein.
  
     0.747
ACL44447.1
KEGG: tel:tlr0066 hypothetical protein.
  
     0.746
ACL45644.1
KEGG: amr:AM1_4393 hypothetical protein.
  
     0.746
ACL46331.1
PFAM: Mo-dependent nitrogenase family protein; KEGG: amr:AM1_2462 Mo-dependent nitrogenase-like protein.
  
     0.737
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.