Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACL43135.1 | ACL43448.1 | Cyan7425_0748 | Cyan7425_1062 | PFAM: response regulator receiver; KEGG: sus:Acid_4296 response regulator receiver protein. | PFAM: response regulator receiver; KEGG: tel:tll0571 two-component response regulator. | 0.660 |
| ACL43135.1 | ACL46720.1 | Cyan7425_0748 | Cyan7425_4410 | PFAM: response regulator receiver; KEGG: sus:Acid_4296 response regulator receiver protein. | PFAM: response regulator receiver; KEGG: ava:Ava_1562 response regulator receiver signal transduction histidine kinase. | 0.403 |
| ACL43135.1 | sasA | Cyan7425_0748 | Cyan7425_0691 | PFAM: response regulator receiver; KEGG: sus:Acid_4296 response regulator receiver protein. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.914 |
| ACL43448.1 | ACL43135.1 | Cyan7425_1062 | Cyan7425_0748 | PFAM: response regulator receiver; KEGG: tel:tll0571 two-component response regulator. | PFAM: response regulator receiver; KEGG: sus:Acid_4296 response regulator receiver protein. | 0.660 |
| ACL43448.1 | sasA | Cyan7425_1062 | Cyan7425_0691 | PFAM: response regulator receiver; KEGG: tel:tll0571 two-component response regulator. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.940 |
| ACL43500.1 | sasA | Cyan7425_1115 | Cyan7425_0691 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ava:Ava_1878 two component transcriptional regulator. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.843 |
| ACL43764.1 | ACL46720.1 | Cyan7425_1391 | Cyan7425_4410 | PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: ana:alr3121 two-component hybrid sensor and regulator. | PFAM: response regulator receiver; KEGG: ava:Ava_1562 response regulator receiver signal transduction histidine kinase. | 0.705 |
| ACL43764.1 | kaiC | Cyan7425_1391 | Cyan7425_0348 | PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: ana:alr3121 two-component hybrid sensor and regulator. | Putative circadian clock protein, KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family. | 0.565 |
| ACL43764.1 | sasA | Cyan7425_1391 | Cyan7425_0691 | PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: ana:alr3121 two-component hybrid sensor and regulator. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.870 |
| ACL45449.1 | sasA | Cyan7425_3121 | Cyan7425_0691 | KEGG: npu:Npun_F0263 MCP methyltransferase, CheR-type with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.875 |
| ACL46061.1 | sasA | Cyan7425_3742 | Cyan7425_0691 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: amr:AM1_4053 two-component transcriptional regulator. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.987 |
| ACL46720.1 | ACL43135.1 | Cyan7425_4410 | Cyan7425_0748 | PFAM: response regulator receiver; KEGG: ava:Ava_1562 response regulator receiver signal transduction histidine kinase. | PFAM: response regulator receiver; KEGG: sus:Acid_4296 response regulator receiver protein. | 0.403 |
| ACL46720.1 | ACL43764.1 | Cyan7425_4410 | Cyan7425_1391 | PFAM: response regulator receiver; KEGG: ava:Ava_1562 response regulator receiver signal transduction histidine kinase. | PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: ana:alr3121 two-component hybrid sensor and regulator. | 0.705 |
| ACL46720.1 | sasA | Cyan7425_4410 | Cyan7425_0691 | PFAM: response regulator receiver; KEGG: ava:Ava_1562 response regulator receiver signal transduction histidine kinase. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.866 |
| ACL46934.1 | sasA | Cyan7425_4627 | Cyan7425_0691 | PFAM: regulatory protein LuxR; response regulator receiver; KEGG: amr:AM1_2217 two component LuxR family transcriptional regulator. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.839 |
| ACL47508.1 | sasA | Cyan7425_5215 | Cyan7425_0691 | PFAM: regulatory protein LuxR; response regulator receiver; KEGG: amr:AM1_1808 two component LuxR family transcriptional regulator. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.895 |
| kaiC | ACL43764.1 | Cyan7425_0348 | Cyan7425_1391 | Putative circadian clock protein, KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family. | PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: ana:alr3121 two-component hybrid sensor and regulator. | 0.565 |
| kaiC | sasA | Cyan7425_0348 | Cyan7425_0691 | Putative circadian clock protein, KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family. | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | 0.934 |
| sasA | ACL43135.1 | Cyan7425_0691 | Cyan7425_0748 | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | PFAM: response regulator receiver; KEGG: sus:Acid_4296 response regulator receiver protein. | 0.914 |
| sasA | ACL43448.1 | Cyan7425_0691 | Cyan7425_1062 | Histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. | PFAM: response regulator receiver; KEGG: tel:tll0571 two-component response regulator. | 0.940 |
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