STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43183.1PFAM: protein of unknown function UPF0150; KEGG: mar:MAE_17890 hypothetical protein. (74 aa)    
Predicted Functional Partners:
ACL43184.1
PFAM: YcfA family protein; KEGG: syn:ssl0258 hypothetical protein.
   
   0.821
ACL45514.1
PFAM: protein of unknown function UPF0150; KEGG: cyt:cce_2847 hypothetical protein.
  
     0.719
ACL43724.1
PFAM: YcfA family protein; KEGG: syf:Synpcc7942_0870 hypothetical protein.
  
 
   0.661
ACL45513.1
PFAM: YcfA family protein; KEGG: cyt:cce_2848 hypothetical protein.
  
 
   0.573
ACL46875.1
PFAM: protein of unknown function UPF0150; KEGG: mar:MAE_22700 hypothetical protein.
  
     0.565
ACL45520.1
PFAM: YcfA family protein; KEGG: gur:Gura_0355 hypothetical protein.
  
 
   0.555
ACL43185.1
Magnesium chelatase ATPase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
       0.489
ACL43186.1
PFAM: protein of unknown function DUF820; KEGG: ava:Ava_1443 hypothetical protein.
       0.429
ACL43249.1
PFAM: protein of unknown function DUF820; KEGG: syn:sll0888 hypothetical protein.
  
     0.429
ACL45443.1
PFAM: protein of unknown function DUF820; KEGG: npu:Npun_F0145 hypothetical protein.
  
     0.401
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.