STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43394.1PFAM: fatty acid desaturase; KEGG: tel:tlr1900 beta-carotene hydroxylase. (325 aa)    
Predicted Functional Partners:
ACL47522.1
PFAM: fatty acid desaturase; KEGG: npu:Npun_F4798 fatty acid desaturase.
     
 0.921
ACL47228.1
TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: ter:Tery_2111 glycosyl transferase family protein.
    
 0.916
ACL44091.1
PFAM: FAD dependent oxidoreductase; KEGG: ter:Tery_0494 FAD dependent oxidoreductase.
   
 
 0.914
ACL42808.1
PFAM: FAD dependent oxidoreductase; KEGG: npu:Npun_F3745 FAD dependent oxidoreductase.
     
 0.902
ACL44339.1
KEGG: amr:AM1_5425 lycopene cyclase.
   
 
  0.900
ACL42995.1
KEGG: tel:tll1052 hypothetical protein.
  
     0.766
ACL46073.1
KEGG: tel:tlr2281 hypothetical protein.
  
     0.744
ACL46225.1
KEGG: tel:tlr1952 hypothetical protein.
  
     0.740
ndhL
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.726
ACL42644.1
KEGG: npu:Npun_R4267 hypothetical protein.
  
     0.720
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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