STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43431.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
ACL43432.1
Hypothetical protein.
       0.664
ACL43430.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mar:MAE_60680 cobalamin biosynthesis protein M.
       0.561
ACL43429.1
KEGG: cyt:cce_3678 hypothetical protein.
       0.543
ACL43428.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cyt:cce_3679 putative cobalt ABC transporter permease protein.
       0.492
ACL43433.1
PFAM: protein of unknown function DUF305; KEGG: nca:Noca_2213 hypothetical protein.
       0.491
ACL43427.1
Cobalt ABC transporter, ATPase subunit; KEGG: mar:MAE_60710 ABC-transporter ATP-binding protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.422
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.