STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43575.1KEGG: npu:Npun_F6573 hypothetical protein. (196 aa)    
Predicted Functional Partners:
ACL44227.1
PFAM: MgtC/SapB transporter; KEGG: cyt:cce_3876 putative MgtC/SapB transporter.
  
  
 0.706
ACL45179.1
PFAM: MgtC/SapB transporter; KEGG: ava:Ava_1213 MgtC/SapB transporter.
  
  
 0.706
ACL43574.1
PFAM: photosystem I reaction centre subunit XI PsaL; KEGG: ana:all0107 photosystem I reaction center subunit XI.
 
     0.633
ACL43576.1
SMART: protein of unknown function SprT; KEGG: syr:SynRCC307_2407 hypothetical protein.
       0.513
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.