STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL43840.1KEGG: ava:Ava_0953 hypothetical protein. (732 aa)    
Predicted Functional Partners:
ACL44816.1
TIGRFAM: CRISPR-associated protein Csc2; KEGG: syp:SYNPCC7002_D0023 hypothetical protein.
  
     0.697
ACL46497.1
KEGG: npu:Npun_R1321 hypothetical protein.
  
     0.666
ACL43270.1
KEGG: ava:Ava_0815 hypothetical protein.
  
     0.629
ACL43310.1
PFAM: PRC-barrel domain protein; KEGG: ana:all4051 AnAKc, homolog of akinete-marker protein.
  
     0.626
ACL43839.1
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ava:Ava_1462 single-strand DNA-binding protein.
  
    0.606
ACL44245.1
PFAM: PRC-barrel domain protein; conserved hypothetical protein; KEGG: ana:all4050 akinete-marker protein, AnAKa.
  
     0.576
ACL43776.1
KEGG: ana:asr1134 hypothetical protein.
  
     0.551
ACL44152.1
KEGG: npu:Npun_F5159 hypothetical protein.
  
     0.551
ACL45596.1
PFAM: CsbD family protein; KEGG: ana:asr1134 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
     0.531
ACL46167.1
KEGG: tel:tll0515 hypothetical protein.
  
     0.514
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.