STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44123.1PFAM: secretion protein HlyD family protein; KEGG: ana:alr7298 unknown protein. (486 aa)    
Predicted Functional Partners:
ACL44122.1
PFAM: cyclic nucleotide-binding; KEGG: ava:Ava_1134 cyclic nucleotide-binding domain-containing protein.
 
     0.912
ACL45375.1
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: npu:Npun_F5052 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter.
 
 
 0.880
ACL44130.1
PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: npu:Npun_F3763 ABC transporter related.
 
 
 0.877
ACL45374.1
PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: npu:Npun_F5050 ABC transporter related.
 
 
 0.877
ACL43962.1
PFAM: cyclic nucleotide-binding; KEGG: ava:Ava_1134 cyclic nucleotide-binding domain-containing protein.
  
     0.698
ACL45805.1
PFAM: Dual specificity protein phosphatase; KEGG: ana:all4761 unknown protein.
  
    0.607
ACL45945.1
PFAM: outer membrane efflux protein; KEGG: tel:tlr1605 probable outer membrane efflux protein.
  
 
 0.530
ACL45946.1
PFAM: outer membrane efflux protein; KEGG: tel:tll0635 hypothetical protein.
  
 
 0.530
ACL42932.1
TIGRFAM: methyltransferase FkbM family; KEGG: ter:Tery_2946 FkbM family methyltransferase.
  
     0.519
ACL44121.1
PFAM: sucrose synthase; glycosyl transferase group 1; KEGG: ana:all4985 sucrose synthase.
       0.493
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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