STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44436.1PFAM: NLP/P60 protein; KEGG: amr:AM1_4717 hypothetical protein. (273 aa)    
Predicted Functional Partners:
ACL44435.1
KEGG: amr:AM1_0431 hypothetical protein.
       0.773
ACL44437.1
Hypothetical protein.
       0.752
ACL44070.1
KEGG: ava:Ava_4015 hypothetical protein.
  
   
 0.694
ACL43121.1
KEGG: amr:AM1_5578 hypothetical protein.
  
   
 0.692
ACL43568.1
KEGG: tel:tll2422 hypothetical protein.
  
   
 0.686
ACL46145.1
KEGG: amr:AM1_5745 hypothetical protein.
  
     0.561
xseB
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.504
ACL43834.1
PFAM: 5'-Nucleotidase domain protein; KEGG: cya:CYA_1059 5'-nucleotidase family protein; Belongs to the 5'-nucleotidase family.
     
 0.433
ACL44438.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: fph:Fphi_0148 hypothetical protein.
       0.433
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.