STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44574.1KEGG: amr:AM1_0004 hypothetical protein. (270 aa)    
Predicted Functional Partners:
ACL43070.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.742
ACL44573.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: amr:AM1_0005 ADP-ribosylglycohydrolase.
       0.689
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.607
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.521
ACL44174.1
KEGG: rru:Rru_A0771 hypothetical protein.
  
 
 0.496
ACL47232.1
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: amr:AM1_3509 aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.485
ACL44570.1
KEGG: amr:AM1_6411 hypothetical protein.
  
    0.461
ACL44575.1
PFAM: S-layer domain protein; Carbohydrate-selective porin OprB; KEGG: ava:Ava_4536 S-layer region-like; Belongs to the OprB family.
       0.437
ACL44572.1
KEGG: amr:AM1_0006 hypothetical protein.
     
 0.432
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.