STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44658.1TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: amr:AM1_5508 geranylgeranyl reductase family protein. (374 aa)    
Predicted Functional Partners:
ACL43185.1
Magnesium chelatase ATPase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.638
ACL46162.1
Chlorophyll synthase, ChlG; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; chlorophyll synthase, ChlG; PFAM: UbiA prenyltransferase; KEGG: ana:all4480 chlorophyll synthase 33 kD subunit.
 
  
 0.561
chlB
Light-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
  
  
 0.540
ACL47279.1
KEGG: tel:tlr0271 magnesium protoporphyrin IX chelatase subunit H; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
  
  
 0.526
ACL44657.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA0083 UbiE/COQ5 family methlytransferase.
       0.511
ACL44659.1
PFAM: NHL repeat containing protein; KEGG: rha:RHA1_ro00505 serine/threonine-protein kinase.
       0.487
ACL44484.1
PFAM: UbiA prenyltransferase; KEGG: amr:AM1_D0196 UbiA family prenyltransferase.
 
  
 0.475
ACL44987.1
Magnesium chelatase, H subunit; KEGG: ava:Ava_1940 hydrogenobyrinic acid a,c-diamide cobaltochelatase; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase.
  
  
 0.475
chlN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
 
  
 0.473
ACL44979.1
PFAM: beta-lactamase domain protein; KEGG: npu:Npun_R5521 beta-lactamase domain-containing protein.
 
    0.467
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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