STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44688.1TIGRFAM: carotene isomerase; PFAM: FAD dependent oxidoreductase; KEGG: syn:sll0033 carotene isomerase. (508 aa)    
Predicted Functional Partners:
ACL45504.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
  
 0.975
ACL44091.1
PFAM: FAD dependent oxidoreductase; KEGG: ter:Tery_0494 FAD dependent oxidoreductase.
 
 
 0.947
ACL44339.1
KEGG: amr:AM1_5425 lycopene cyclase.
  
 
 0.928
ACL46502.1
PFAM: Squalene/phytoene synthase; KEGG: amr:AM1_4825 phytoene synthase.
  
 0.872
ACL46501.1
KEGG: ana:alr1832 phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase.
 
   
 0.770
ACL44033.1
TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: syp:SYNPCC7002_A2476 geranylgeranyl reductase.
 
  
 0.698
ACL46162.1
Chlorophyll synthase, ChlG; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; chlorophyll synthase, ChlG; PFAM: UbiA prenyltransferase; KEGG: ana:all4480 chlorophyll synthase 33 kD subunit.
 
  
 0.695
ACL43185.1
Magnesium chelatase ATPase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.665
ACL43793.1
KEGG: amr:AM1_4451 hypothetical protein.
  
     0.634
ACL42663.1
PFAM: metallophosphoesterase; KEGG: amr:AM1_3313 hypothetical protein.
  
     0.628
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.