STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44872.1PFAM: protein of unknown function DUF1292; KEGG: amr:AM1_0035 hypothetical protein. (184 aa)    
Predicted Functional Partners:
cpcS
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.770
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.768
ACL46710.1
KEGG: amr:AM1_4418 hypothetical protein.
  
     0.765
ACL43296.1
KEGG: ter:Tery_3619 hypothetical protein.
  
     0.764
ACL47035.1
KEGG: tel:tll0135 hypothetical protein.
  
     0.759
ACL44869.1
PFAM: GCN5-related N-acetyltransferase; KEGG: amr:AM1_0037 acetyltransferase.
 
     0.757
ACL44994.1
KEGG: amr:AM1_2155 hypothetical protein.
  
     0.752
ACL45719.1
KEGG: tel:tsr0373 hypothetical protein.
  
     0.752
ACL44844.1
PFAM: Domain of unknown function DUF1825; KEGG: tel:tll2044 hypothetical protein.
  
     0.750
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.749
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.