STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL44919.1PFAM: GCN5-related N-acetyltransferase; KEGG: ava:Ava_1403 GCN5-related N-acetyltransferase. (156 aa)    
Predicted Functional Partners:
ACL44920.1
KEGG: npu:Npun_F4498 hypothetical protein.
       0.798
xseB
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.741
ACL46075.1
KEGG: amr:AM1_3547 hypothetical protein.
  
    0.739
ACL45250.1
KEGG: npu:Npun_F0502 TPR repeat-containing protein.
  
     0.736
ACL46136.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:glr3794 hypothetical protein.
  
     0.720
ACL45299.1
PFAM: Domain of unknown function DUF1824; KEGG: ana:alr1296 hypothetical protein.
  
     0.717
ACL44008.1
KEGG: ava:Ava_3220 hypothetical protein.
  
     0.691
ACL44918.1
Hypothetical protein.
       0.664
ACL44635.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ava:Ava_0901 TPR repeat-containing protein.
  
     0.616
ACL46497.1
KEGG: npu:Npun_R1321 hypothetical protein.
  
     0.607
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.