STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL45018.1PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: gvi:glr2970 unknown protein. (335 aa)    
Predicted Functional Partners:
ACL44539.1
KEGG: rce:RC1_2320 acyltransferase domain, membrane protein.
  
     0.677
ACL43480.1
PFAM: glycosyl transferase group 1; KEGG: pab:PAB0827 galactosyltransferase or LPS biosynthesis RfbU related protein.
  
     0.614
ACL44503.1
KEGG: cyt:cce_0815 hypothetical protein.
  
     0.492
ACL44386.1
PFAM: Phytanoyl-CoA dioxygenase; KEGG: npu:Npun_F0215 phytanoyl-CoA dioxygenase.
  
     0.438
ACL45019.1
KEGG: npu:Npun_BF211 transposase, IS4 family protein.
       0.420
ACL45015.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bid:Bind_0505 oxidoreductase FAD/NAD(P)-binding subunit.
       0.416
ACL45016.1
PFAM: cyclic nucleotide-binding; KEGG: bid:Bind_0504 cyclic nucleotide-binding protein.
       0.416
ACL45017.1
KEGG: bid:Bind_0503 4Fe-4S ferredoxin, iron-sulfur binding.
       0.416
ACL45013.1
Coenzyme F420 hydrogenase; PFAM: nickel-dependent hydrogenase large subunit; KEGG: bid:Bind_0507 nickel-dependent hydrogenase large subunit.
       0.411
ACL45014.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: scl:sce4574 putative hydrogenase.
       0.411
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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