STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL45219.1PFAM: AMP-dependent synthetase and ligase; KEGG: ava:Ava_4108 beta-ketoacyl synthase. (586 aa)    
Predicted Functional Partners:
ACL45225.1
Beta-ketoacyl synthase; PFAM: Thioesterase; Enoyl-CoA hydratase/isomerase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_CR073 KR.
 0.998
ACL45230.1
Beta-ketoacyl synthase; PFAM: phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: npu:Npun_R2079 beta-ketoacyl synthase.
 0.980
ACL45220.1
PFAM: phosphopantetheine-binding; KEGG: npu:Npun_F3357 phosphopantetheine-binding.
 
 
 0.970
ACL46306.1
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ana:alr0240 malonyl coenzyme A-acyl carrier protein transacylase.
    
 0.915
ACL46366.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mar:MAE_01090 bidirectional hydrogenase diaphorase subunit.
    
 
 0.915
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
 
 
 0.910
ACL43707.1
PFAM: AMP-dependent synthetase and ligase; KEGG: gvi:glr1122 probable long chain fatty acid CoA ligase.
 
    
0.908
ACL46815.1
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
  
 0.906
ACL45399.1
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: amr:AM1_2148 3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.868
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.854
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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