STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL45304.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: npu:Npun_F2214 cupin 2 domain-containing protein. (160 aa)    
Predicted Functional Partners:
ACL45303.1
PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: similar to C-methyltransferase.
 
     0.769
ACL43757.1
PFAM: cyclase family protein; KEGG: glo:Glov_0077 cyclase family protein.
  
    0.531
ACL45305.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Clp domain protein; KEGG: amr:AM1_6307 transcriptional regulator with ATPase activity.
  
    0.491
ACL42829.1
PFAM: O-methyltransferase family 2; KEGG: pzu:PHZ_c1075 methyltransferase/methylase.
  
     0.418
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.