STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL45440.1KEGG: npu:Npun_R6410 hypothetical protein. (112 aa)    
Predicted Functional Partners:
ACL45439.1
KEGG: npu:Npun_R6409 peptidase S1 and S6, chymotrypsin/Hap.
       0.773
ACL45437.1
Hypothetical protein; KEGG: paa:Paes_1105 TPR repeat-containing protein.
       0.661
ACL45438.1
KEGG: npu:Npun_BF211 transposase, IS4 family protein.
       0.661
ACL45436.1
PFAM: transposase IS66; KEGG: ava:Ava_C0187 transposase IS66.
       0.526
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.