STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL45875.1PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2476 major facilitator superfamily MFS_1. (424 aa)    
Predicted Functional Partners:
ACL45830.1
PFAM: extracellular solute-binding protein family 1; KEGG: ter:Tery_3377 extracellular solute-binding protein.
  
  
 0.735
ACL43199.1
KEGG: amr:AM1_2040 hypothetical protein.
  
  
 0.619
ACL43457.1
PFAM: phosphate transporter; KEGG: azc:AZC_4713 phosphate/sulphate permeases.
  
   
 0.609
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
     
 0.541
ACL45873.1
Cache sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Cache domain protein; KEGG: syf:Synpcc7942_1816 periplasmic sensor hybrid histidine kinase.
     
 0.492
ACL47232.1
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: amr:AM1_3509 aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.469
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.468
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.447
ACL43178.1
ATP-binding region ATPase domain protein; PFAM: tyrosine protein kinase; response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: npu:Npun_F0342 multi-sensor signal transduction multi-kinase.
  
  
 0.401
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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