STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46163.1PFAM: glycosyl transferase family 2; KEGG: cyt:cce_2854 glycosyl transferase. (385 aa)    
Predicted Functional Partners:
ACL43153.1
KEGG: amr:AM1_3430 hypothetical protein.
  
     0.680
ACL43275.1
KEGG: ava:Ava_1276 hypothetical protein.
  
     0.637
ACL44660.1
KEGG: ter:Tery_2626 hypothetical protein.
  
     0.589
ACL43415.1
KEGG: amr:AM1_5928 hypothetical protein.
  
     0.548
ACL46060.1
KEGG: mar:MAE_08870 alpha/beta hydrolase.
  
     0.546
ACL42660.1
PFAM: band 7 protein; KEGG: cyt:cce_4337 hypothetical protein.
  
     0.532
ACL43029.1
KEGG: npu:Npun_F4222 hypothetical protein.
  
     0.476
ACL45759.1
PFAM: protein of unknown function UPF0136; KEGG: npu:Npun_F3607 hypothetical protein.
  
     0.471
ACL44553.1
Hypothetical protein; KEGG: swi:Swit_2672 glycosyl transferase family protein.
  
    0.470
ACL43186.1
PFAM: protein of unknown function DUF820; KEGG: ava:Ava_1443 hypothetical protein.
  
     0.466
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.