STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46254.1KEGG: ava:Ava_4554 TPR repeat-containing protein. (428 aa)    
Predicted Functional Partners:
ACL44140.1
TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: npu:Npun_R6496 putative ammonia monooxygenase.
  
     0.656
ACL44241.1
PFAM: GCN5-related N-acetyltransferase; KEGG: ana:all1990 N-terminal acetyltransferase.
  
     0.556
ACL46866.1
Conserved hypothetical protein; KEGG: ana:alr3583 unknown protein.
  
     0.476
ACL46253.1
KEGG: ter:Tery_2284 hypothetical protein.
       0.473
ACL43814.1
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: npu:Npun_R2796 addiction module component.
  
     0.467
ACL46269.1
KEGG: npu:Npun_F0340 cupin 2 domain-containing protein.
  
     0.425
ACL42952.1
KEGG: amr:AM1_2516 hypothetical protein.
  
 
   0.414
ACL43965.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: syn:slr0600 putative thioredoxin reductase.
  
    0.412
ACL42953.1
PFAM: WD-40 repeat protein; KEGG: amr:AM1_2517 WD-40 repeat-containing protein.
  
 
  0.409
ACL46314.1
KEGG: amr:AM1_5159 Zn-dependent protease.
  
     0.401
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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