STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46294.1PFAM: Lanthionine synthetase C family protein; KEGG: npu:Npun_F5047 lanthionine synthetase C family protein. (1117 aa)    
Predicted Functional Partners:
ACL44288.1
PFAM: S-layer domain protein; Carbohydrate-selective porin OprB; KEGG: ava:Ava_C0023 major outer membrane protein; Belongs to the OprB family.
  
     0.597
ACL46052.1
KEGG: ana:alr1498 unknown protein.
  
     0.574
ACL46293.1
KEGG: npu:Npun_AF077 hypothetical protein.
       0.547
ACL42910.1
PFAM: protein of unknown function DUF181; KEGG: ter:Tery_2355 hypothetical protein.
 
     0.528
ACL45375.1
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: npu:Npun_F5052 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter.
 
   
 0.488
ACL45373.1
KEGG: npu:Npun_F5048 secretion protein HlyD.
  
     0.469
ACL44175.1
Plasmid maintenance system antidote protein, XRE family; TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: xfa:XF1708 hypothetical protein.
  
     0.467
ACL46295.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tel:tll0759 permease protein of sugar ABC transporter.
       0.450
ACL46599.1
PFAM: histidine kinase HAMP region domain protein; KEGG: npu:Npun_BF042 sensor protein.
  
     0.448
ACL45374.1
PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: npu:Npun_F5050 ABC transporter related.
 
   
 0.441
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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