STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46481.1PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: npu:Npun_R6110 cytochrome c biogenesis protein, transmembrane region. (238 aa)    
Predicted Functional Partners:
ACL46482.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: npu:Npun_R6111 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 0.986
ACL47296.1
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: amr:AM1_1810 cytochrome c biogenesis protein, thiol reduction transmembrane region, CcdA.
  
     0.609
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.542
ACL46478.1
KEGG: npu:Npun_R6109 hypothetical protein.
 
     0.531
ccsA
Cytochrome c-type biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
  
  
 0.520
ACL45732.1
KEGG: amr:AM1_1994 hypothetical protein.
   
    0.516
ccsB
ResB family protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
  
  
 0.468
ACL46480.1
Hypothetical protein.
       0.458
ACL46483.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amr:AM1_1364 branched-chain amino acid ABC transporter, ATP-binding protein.
       0.449
ACL45974.1
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain; KEGG: npu:Npun_R0672 thioredoxin reductase.
  
  
 0.436
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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