STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46521.1KEGG: lch:Lcho_0970 hypothetical protein. (422 aa)    
Predicted Functional Partners:
ACL46520.1
KEGG: syd:Syncc9605_0146 hypothetical protein.
      0.956
ACL46522.1
Hypothetical protein.
       0.689
ACL46519.1
PFAM: glycosyl transferase family 8; KEGG: syf:Synpcc7942_2287 hypothetical protein.
 
    0.589
ACL46518.1
KEGG: syd:Syncc9605_0145 hypothetical protein.
       0.586
ACL46523.1
PFAM: glycosyl transferase family 8; KEGG: syf:Synpcc7942_1271 hypothetical protein.
  
    0.563
ACL46524.1
Hypothetical protein.
       0.561
ACL46516.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ana:all0916 putative ABC-2 type transport system ATP-binding protein.
  
   0.474
ACL46517.1
PFAM: ABC-2 type transporter; KEGG: ana:all0917 putative ABC-2 type transport system permease protein.
  
    0.453
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.