STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46587.1KEGG: ana:alr2783 unknown protein. (279 aa)    
Predicted Functional Partners:
ACL46588.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: amr:AM1_3661 glycine/betaine ABC transporter, periplasmic component, putative.
       0.686
ACL45081.1
PFAM: nitrogen regulatory protein P-II; KEGG: ava:Ava_0137 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.626
ACL47359.1
KEGG: ana:all2133 hypothetical protein.
    
 
 0.519
ACL46586.1
TIGRFAM: C-3',4' desaturase CrtD; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: npu:Npun_R2959 phytoene dehydrogenase-related protein.
       0.475
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.