STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL46830.1PFAM: protein of unknown function DUF433; KEGG: mar:MAE_05280 hypothetical protein. (97 aa)    
Predicted Functional Partners:
ACL42913.1
KEGG: cyt:cce_3368 hypothetical protein.
 
   
 0.761
ACL46831.1
KEGG: mar:MAE_05270 hypothetical protein.
     
 0.687
ACL45619.1
PFAM: protein of unknown function UPF0175; KEGG: mar:MAE_01060 hypothetical protein.
  
     0.627
ACL47229.1
PFAM: protein of unknown function DUF433; KEGG: syn:slr0770 hypothetical protein.
  
     0.562
ACL44634.1
KEGG: mar:MAE_20130 hypothetical protein.
  
     0.556
ACL45523.1
KEGG: mar:MAE_29040 adenine specific DNA methyltransferase.
  
     0.556
ACL46829.1
PFAM: protein of unknown function DUF608; KEGG: npu:Npun_R1544 hypothetical protein.
       0.505
ACL46136.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:glr3794 hypothetical protein.
  
     0.471
ACL42780.1
KEGG: npu:Npun_R5786 hypothetical protein.
  
     0.461
ACL43709.1
KEGG: mar:MAE_54200 hypothetical protein.
  
     0.457
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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