STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL47368.1PFAM: protein of unknown function DUF456; KEGG: npu:Npun_F5791 hypothetical protein. (180 aa)    
Predicted Functional Partners:
ACL47367.1
PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: npu:Npun_R0930 heat repeat-containing PBS lyase.
       0.773
ACL47365.1
PFAM: glycosyl transferase family 2; KEGG: tel:tll0064 probable glycosyltransferase.
       0.466
ACL47366.1
PFAM: pentapeptide repeat protein; KEGG: kctd9; BTB/POZ domain-containing protein.
       0.466
ACL47364.1
Cyclic peptide transporter; KEGG: tel:tlr1649 ABC transporter ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.442
ACL43033.1
PFAM: adenylate cyclase; KEGG: syp:SYNPCC7002_A0909 adenylate cyclase.
  
     0.416
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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