STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL47475.1PFAM: Glycosyltransferase 28 domain; KEGG: gvi:gll3711 probable glucosyltransferase EpsF homolog. (171 aa)    
Predicted Functional Partners:
ACL47474.1
PFAM: Oligosaccharide biosynthesis protein Alg14 like; KEGG: gvi:gll3712 probable glucosyltransferase EpsE homolog.
   
 0.952
ACL45036.1
PFAM: Oligosaccharide biosynthesis protein Alg14 like; KEGG: ana:all2287 glucosyltransferase.
   
 0.802
ACL47473.1
PFAM: polysaccharide biosynthesis protein; KEGG: gvi:glr0457 unknown protein.
 
     0.801
ACL47467.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: gvi:gll3716 unknown protein.
 
     0.765
ACL47469.1
PFAM: glycosyl transferase group 1; KEGG: gvi:gll3714 unknown protein.
 
     0.665
ACL47487.1
KEGG: gvi:gll4265 unknown protein.
  
     0.648
ACL47476.1
PFAM: glycosyl transferase family 2; KEGG: gvi:gll2192 probable glycosyl transferase.
       0.553
ACL47477.1
Conserved hypothetical protein; KEGG: gvi:gll4265 unknown protein.
       0.553
ACL45026.1
Conserved hypothetical protein; KEGG: ana:alr2295 unknown protein.
 
     0.547
ACL47478.1
TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ava:Ava_1106 nucleotidyl transferase.
       0.495
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.