Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0058PFAM: GtrA family protein; KEGG: azc:AZC_1144 hypothetical protein. (133 aa)    
Predicted Functional Partners:
Bind_0756
KEGG: gdi:GDI2237 hypothetical protein.
 
     0.560
Bind_0202
KEGG: bbt:BBta_3001 hypothetical protein.
  
     0.508
Bind_2452
KEGG: bja:blr3456 hypothetical protein.
  
     0.504
Bind_1647
PFAM: YdjC family protein; KEGG: azo:azo0748 cellobiose phosphorylase.
 
     0.490
Bind_0057
PFAM: protein of unknown function DUF992; KEGG: azc:AZC_3134 hypothetical protein.
 
     0.456
Bind_1650
PFAM: glycosyl transferase family 2; KEGG: syn:sll0501 putative glycosyl transferase.
 
  
 0.445
Bind_3031
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin).
      
 0.411
Bind_1817
KEGG: cph:Cpha266_2437 hypothetical protein.
 
   
 0.407
Bind_2402
KEGG: bra:BRADO5401 conserved hypothetical protein (TPR repeat).
 
     0.401
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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