Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0062PFAM: Glutathione S-transferase domain; KEGG: bja:bll7983 glutathione transferase. (231 aa)    
Predicted Functional Partners:
Bind_0061
PFAM: regulatory protein TetR; KEGG: bja:blr7984 transcriptional regulatory protein.
     
 0.557
Bind_1749
PFAM: 2-nitropropane dioxygenase NPD; KEGG: azc:AZC_0931 putative 2-nitropropane dioxygenase.
  
     0.416
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.412
Bind_0881
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
    
 
 0.410
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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