STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0148KEGG: bbt:BBta_1138 hypothetical protein. (64 aa)    
Predicted Functional Partners:
Bind_0443
PFAM: protein of unknown function DUF465; KEGG: xau:Xaut_2598 protein of unknown function DUF465.
  
     0.750
Bind_1632
PFAM: protein of unknown function DUF1214; KEGG: nha:Nham_1402 protein of unknown function DUF1214.
  
     0.722
Bind_0727
KEGG: xau:Xaut_4645 conserved protein CoxF.
  
     0.720
Bind_1070
KEGG: rpd:RPD_0792 hypothetical protein.
  
     0.717
Bind_0149
TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rle:RL4317 putative cobalamin adenosultransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
    0.704
Bind_0924
KEGG: mes:Meso_1118 hypothetical protein.
  
     0.654
Bind_3233
PFAM: protein of unknown function DUF1036; KEGG: azc:AZC_0444 hypothetical protein.
  
     0.654
Bind_1173
KEGG: mex:Mext_4307 hypothetical protein.
  
     0.650
Bind_3592
KEGG: mex:Mext_4396 hypothetical protein.
  
     0.647
Bind_0268
KEGG: nwi:Nwi_0527 hypothetical protein.
  
     0.645
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.