STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0193Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. (527 aa)    
Predicted Functional Partners:
Bind_0195
PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B2119 predicted membrane fusion protein of efflux pump.
 
 
 0.955
Bind_0194
PFAM: Fusaric acid resistance protein conserved region; KEGG: bxe:Bxe_B2120 conserved hypothetical membrane protein, putative efflux pump.
 
   
 0.953
Bind_0196
KEGG: bxe:Bxe_B2118 hypothetical protein.
 
   
 0.942
Bind_2450
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll5081 putative multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.921
Bind_1725
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 type I secretion outer membrane protein, TolC family.
     
0.904
Bind_3231
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpe:RPE_2748 type I secretion outer membrane protein, TolC family.
     
 0.904
Bind_2921
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bja:blr4455 putative outer-membrane immunogenic protein precursor.
     
  0.900
Bind_2501
PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0236 putative secretion protein, HlyD-family.
 
 
 0.595
Bind_2026
PFAM: secretion protein HlyD family protein; KEGG: gbe:GbCGDNIH1_1724 multidrug resistance protein A.
 
 
 0.577
Bind_1717
PFAM: protein of unknown function DUF490; KEGG: xau:Xaut_4225 protein of unknown function DUF490.
 
     0.574
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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