Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0285PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1567 glycosyl transferase, family 2. (443 aa)    
Predicted Functional Partners:
Bind_1422
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ppd:Ppro_2287 cobyrinic acid a,c-diamide synthase.
  
 
 0.750
Bind_1958
KEGG: scl:sce7776 two-component hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.642
Bind_0755
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat protein.
  
 
 0.607
Bind_0286
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I1339 oxidoreductase, short-chain dehydrogenase/reductase family.
      0.594
Bind_0287
PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_B2727 putative MaoC-like dehydratase.
 
     0.469
Bind_0284
PFAM: fatty acid desaturase; KEGG: cme:CMP318C sphingolipid delta 4 desaturase protein DES-1.
       0.434
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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