Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0314PFAM: outer membrane efflux protein; KEGG: xau:Xaut_4826 outer membrane efflux protein. (486 aa)    
Predicted Functional Partners:
Bind_0316
KEGG: bbt:BBta_p0116 hypothetical protein.
 
 
 0.948
Bind_0315
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bmu:Bmul_6291 multicopper oxidase type 3.
 
   
 0.944
Bind_0338
KEGG: xau:Xaut_0977 putative transmembrane anti-sigma factor.
  
     0.558
Bind_0317
KEGG: gvi:glr3185 hypothetical protein.
 
 
   0.525
Bind_2186
PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mex:Mext_2414 multicopper oxidase type 3.
 
   
 0.471
Bind_2315
KEGG: atc:AGR_L_450 hypothetical protein.
  
     0.456
Bind_0195
PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B2119 predicted membrane fusion protein of efflux pump.
  
   0.413
Bind_0809
PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_7850 putative HlyD-family secretion protein.
  
   0.413
Bind_1399
PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4754 secretion protein HlyD family protein.
  
   0.413
Bind_1744
PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_0564 secretion protein HlyD family protein.
  
   0.413
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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