Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0449PFAM: fatty acid hydroxylase; KEGG: osa:4352850 Os12g0628400. (235 aa)    
Predicted Functional Partners:
Bind_0284
PFAM: fatty acid desaturase; KEGG: cme:CMP318C sphingolipid delta 4 desaturase protein DES-1.
 
  
 0.733
Bind_1149
KEGG: net:Neut_1100 hypothetical protein.
 
     0.583
Bind_3011
KEGG: ajs:Ajs_3068 hypothetical protein.
 
     0.568
Bind_0451
KEGG: mlo:mlr5650 ceramide glucosyltransferase.
 
     0.551
Bind_0450
PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: xau:Xaut_3098 peptidase U6 penicillin-insensitive murein endopeptidase.
       0.465
Bind_1113
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase.
   
 
 0.418
Bind_0437
KEGG: mag:amb3806 spore coat polysaccharide biosynthesis protein F.
  
     0.406
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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