Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Bind_0463Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4490 LysR substrate-binding; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
Bind_2066
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_0951 transcriptional regulator, LysR family.
  
     0.714
Bind_2980
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpe:BP2857 putative LysR-family transcriptional regulator.
  
     0.641
Bind_0462
PFAM: Glutathione S-transferase domain; KEGG: scl:sce6962 probable glutathione S-transferase; Belongs to the GST superfamily.
 
     0.607
Bind_2540
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3423 transcriptional regulator, LysR family.
  
     0.589
Bind_0984
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sco:SCO6555 LysR-family transcriptional regulator.
  
     0.580
Bind_2962
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3081 transcriptional regulator, LysR family.
  
     0.556
Bind_0525
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpd:BURPS668_0795 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.538
Bind_2537
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3598 LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.490
Bind_3456
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: hne:HNE_1468 transcriptional regulator, LysR family.
  
     0.413
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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