Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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[Homology]
Score
Bind_0490Putative ferredoxin protein, FixX; Could be a 3Fe-4S cluster-containing protein. (100 aa)    
Predicted Functional Partners:
Bind_0489
Electron-transferring-flavoprotein dehydrogenase; Part of an electron transfer system. Belongs to the ETF-QO/FixC family.
 
 
 0.975
Bind_0488
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: azc:AZC_3448 FixB protein.
 
 0.961
Bind_0487
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mlo:mll5862 nitrogen fixation protein,FixA.
 
 0.949
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.755
Bind_1751
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: mag:amb3229 electron transfer flavoprotein.
  
 0.662
Bind_3272
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: oan:Oant_1012 electron transfer flavoprotein alpha subunit.
  
 0.662
Bind_0395
PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: gdi:GDI0432 hypothetical protein.
  
    0.652
Bind_0400
PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: bra:BRADO5416 conserved hypothetical protein (superfamily of ARM repeat); LRV protein Fes4 cluster in N-terminus.
  
    0.652
Bind_0409
KEGG: rpe:RPE_4534 hypothetical protein.
 
    0.635
Bind_1752
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dar:Daro_1211 electron transfer flavoprotein beta-subunit.
  
 0.609
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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