Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0511Glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_4126 glyoxylate reductase. (331 aa)    
Predicted Functional Partners:
Bind_1721
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: gbe:GbCGDNIH1_0364 glycerate dehydrogenase.
 
 0.927
Bind_2209
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: gbe:GbCGDNIH1_0364 glycerate dehydrogenase.
 
 0.926
Bind_3524
Serine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: mex:Mext_4200 aminotransferase class V.
  
 
 0.915
Bind_1899
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: swi:Swit_0991 D-lactate dehydrogenase (cytochrome).
   
 0.908
Bind_1900
PFAM: FAD linked oxidase domain protein; KEGG: mes:Meso_0363 FAD linked oxidase-like.
   
 0.908
Bind_1885
PFAM: malate synthase; KEGG: aeh:Mlg_1646 malate synthase G.
   
 
 0.906
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.906
Bind_0047
PFAM: isocitrate lyase and phosphorylmutase; KEGG: swi:Swit_2926 isocitrate lyase.
     
 0.905
Bind_0629
KEGG: xau:Xaut_1019 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
    
  0.901
Bind_1901
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rsp:RSP_1018 glycolate oxidase iron-sulfur subunit.
    
  0.901
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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