Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0558PFAM: protein of unknown function DUF162; KEGG: pde:Pden_2924 protein of unknown function DUF162. (216 aa)    
Predicted Functional Partners:
Bind_0559
PFAM: protein of unknown function DUF162; KEGG: pde:Pden_2925 iron-sulfur cluster binding protein.
 
 
 0.997
Bind_0560
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pde:Pden_2926 protein of unknown function DUF224, cysteine-rich region domain protein.
 
 
 0.976
Bind_0557
KEGG: xau:Xaut_1107 hypothetical protein.
       0.779
Bind_0561
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
   
 0.718
Bind_1901
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rsp:RSP_1018 glycolate oxidase iron-sulfur subunit.
 
 
 0.659
Bind_0072
KEGG: xau:Xaut_2720 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.647
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.564
Bind_2063
PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: mex:Mext_0827 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
  
  
 0.540
Bind_0503
KEGG: fra:Francci3_4500 4Fe-4S ferredoxin, iron-sulfur binding.
  
 
 0.538
Bind_2202
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: azc:AZC_2420 phosphate acetyl/butyryltransferase family protein.
  
  
 0.424
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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