Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0594PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmt:PMT0108 ABC transporter, ATP binding protein. (260 aa)    
Predicted Functional Partners:
Bind_0595
PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_A3799 ABC O-antigen/lipopolysaccharide exporter, inner membrane subunit.
 
 0.999
Bind_1033
PFAM: polysaccharide export protein; KEGG: bra:BRADO2217 putative capsule polysaccharide export outer membrane protein precursor.
  
  
 0.798
Bind_0835
PFAM: polysaccharide export protein; KEGG: har:HEAR0714 putative polysaccharide export protein.
  
  
 0.769
Bind_0914
PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase family 2.
 
  
 0.698
Bind_1140
PFAM: phosphoribosyltransferase; KEGG: nwi:Nwi_0385 phosphoribosyltransferase.
   
    0.687
Bind_0755
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat protein.
 
   
 0.634
Bind_1192
KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.598
Bind_2642
KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.598
Bind_3065
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_2672 tetratricopeptide TPR_2 repeat protein.
 
   
 0.536
Bind_3033
PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2884 glycosyl transferase, family 2.
 
  
 0.526
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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