Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0634KEGG: ngo:NGO0496 hypothetical protein, putative phage associated protein. (454 aa)    
Predicted Functional Partners:
Bind_0633
PFAM: protein of unknown function DUF264; KEGG: bvi:Bcep1808_1170 protein of unknown function DUF264.
     
 0.722
Bind_2723
KEGG: xau:Xaut_3172 hypothetical protein.
   
 
 0.645
Bind_2726
PFAM: conserved hypothetical protein; KEGG: ngo:NGO0507 hypothetical protein, putative phage associated protein.
   
   0.638
Bind_2727
KEGG: ngo:NGO0506 hypothetical protein, putative phage associated protein.
   
   0.638
Bind_0632
KEGG: xfa:XF1673 hypothetical protein.
     
 0.627
Bind_0635
KEGG: ngo:NGO0497 hypothetical protein, putative phage associated protein.
       0.608
Bind_2759
PFAM: glycoside hydrolase family 5; KEGG: amr:AM1_1890 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
   0.586
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
  
 0.459
Bind_0638
KEGG: mag:amb1781 hypothetical protein.
       0.455
Bind_0631
Hypothetical protein.
       0.440
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.