Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0635KEGG: ngo:NGO0497 hypothetical protein, putative phage associated protein. (443 aa)    
Predicted Functional Partners:
Bind_0634
KEGG: ngo:NGO0496 hypothetical protein, putative phage associated protein.
       0.608
Bind_0636
KEGG: ngo:NGO0498 hypothetical protein, putative phage associated protein.
       0.549
Bind_0633
PFAM: protein of unknown function DUF264; KEGG: bvi:Bcep1808_1170 protein of unknown function DUF264.
     
 0.538
Bind_0637
Hypothetical protein.
       0.470
Bind_0638
KEGG: mag:amb1781 hypothetical protein.
       0.468
Bind_0640
KEGG: aci:ACIAD2161 hypothetical protein.
       0.467
Bind_0639
Hypothetical protein.
       0.464
Bind_0632
KEGG: xfa:XF1673 hypothetical protein.
       0.409
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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