STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0638KEGG: mag:amb1781 hypothetical protein. (275 aa)    
Predicted Functional Partners:
Bind_0640
KEGG: aci:ACIAD2161 hypothetical protein.
       0.804
Bind_0639
Hypothetical protein.
       0.773
Bind_0637
Hypothetical protein.
       0.762
Bind_0636
KEGG: ngo:NGO0498 hypothetical protein, putative phage associated protein.
       0.705
Bind_0641
KEGG: aci:ACIAD2160 hypothetical protein.
       0.555
Bind_0642
Hypothetical protein.
       0.520
Bind_0635
KEGG: ngo:NGO0497 hypothetical protein, putative phage associated protein.
       0.470
Bind_0634
KEGG: ngo:NGO0496 hypothetical protein, putative phage associated protein.
       0.455
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.