Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Bind_0647PFAM: Chromate transporter; KEGG: ana:all1110 chromate transport protein. (178 aa)    
Predicted Functional Partners:
Bind_0648
PFAM: Chromate transporter; KEGG: ccr:CC_1097 chromate transporter, putative.
 
     0.927
Bind_1522
PFAM: Chromate transporter; KEGG: reu:Reut_A2355 chromate transporter.
 
     0.606
Bind_0649
PFAM: DNA polymerase III chi subunit HolC; KEGG: mex:Mext_4656 DNA polymerase III chi subunit HolC.
       0.528
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.525
Bind_2245
KEGG: azc:AZC_1792 hypothetical protein.
  
     0.468
Bind_1817
KEGG: cph:Cpha266_2437 hypothetical protein.
  
     0.451
Bind_0592
KEGG: ana:alr0587 unknown protein.
  
     0.435
Bind_2076
KEGG: mex:Mext_4786 membrane protein involved in the export of O-antigen and teichoic acid-like protein.
  
     0.410
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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