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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0701PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2942 hypothetical protein. (141 aa)    
Predicted Functional Partners:
Bind_3640
PFAM: cytochrome c class I; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6161 cytochrome c, class I.
  
     0.589
Bind_0702
PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_0555 alpha/beta hydrolase fold.
  
    0.566
Bind_2551
PFAM: Rhodanese domain protein; KEGG: bbt:BBta_2586 putative thiosulfate sulfurtransferase.
  
     0.474
Bind_1105
Putative transmembrane anti-sigma factor; KEGG: bbr:BB1303 hypothetical protein.
  
     0.441
Bind_2691
PFAM: Rhodanese domain protein; KEGG: bja:bll7966 putative thiosulfate sulfurtransferase.
 
     0.435
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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