Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0835PFAM: polysaccharide export protein; KEGG: har:HEAR0714 putative polysaccharide export protein. (272 aa)    
Predicted Functional Partners:
Bind_0837
PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase.
 
 
 0.973
Bind_1135
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO7056 putative exopolysaccharide biosynthesis protein.
 
 
 0.973
Bind_2762
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bja:bll2362 succinoglycan biosynthesis transport protein.
 
 
 0.969
Bind_2644
Capsular exopolysaccharide family; KEGG: bja:bll2362 succinoglycan biosynthesis transport protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
 
 0.966
Bind_0806
PFAM: lipopolysaccharide biosynthesis protein; KEGG: azc:AZC_2186 putative ATPase.
 
 
 0.944
Bind_1033
PFAM: polysaccharide export protein; KEGG: bra:BRADO2217 putative capsule polysaccharide export outer membrane protein precursor.
  
  
 0.922
Bind_0594
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmt:PMT0108 ABC transporter, ATP binding protein.
  
  
 0.769
Bind_0595
PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_A3799 ABC O-antigen/lipopolysaccharide exporter, inner membrane subunit.
  
  
 0.756
Bind_1034
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bra:BRADO2232 putative UDP-glucose lipid carrier transferase; putative membrane protein.
 
  
 0.746
Bind_0658
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1044 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.697
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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